DATASET_COLORSTRIP #In colored strip datasets, each ID is associated to a color box/strip and can have an optional label. Color can be specified in hexadecimal, RGB or RGBA notation. When using RGB or RGBA notation, you cannot use COMMA as the dataset separator #lines starting with a hash are comments and ignored during parsing #=================================================================# # MANDATORY SETTINGS # #=================================================================# #select the separator which is used to delimit the data below (TAB,SPACE or COMMA).This separator must be used throughout this file (except in the SEPARATOR line, which uses space). #SEPARATOR TAB #SEPARATOR COMMA SEPARATOR SPACE #label is used in the legend table (can be changed later) DATASET_LABEL ZoomTwo #dataset color (can be changed later) COLOR #000000 #=================================================================# # OPTIONAL SETTINGS # #=================================================================# #If COLOR_BRANCHES is set to 1, branches of the tree will be colored according to the colors of the strips above the leaves. #When all children of a node have the same color, it will be colored the same, ie. the color will propagate inwards towards the root. COLOR_BRANCHES 0 #each dataset can have a legend, which is defined below #for each row in the legend, there should be one shape, color and label #shape should be a number between 1 and 5: #1: square #2: circle #3: star #4: right pointing triangle #5: left pointing triangle LEGEND_TITLE Taxonomy LEGEND_SHAPES 1 1 1 1 1 1 1 1 1 1 1 LEGEND_COLORS #8dd3c7 #ffff33 #fb8072 #bebada #80b1d3 #fdb462 #b3de69 #fccde5 #bc80bd #d9d9d9 #ccebc5 LEGEND_LABELS Amoebozoa Other_Ophistokonts Rhodophyta Glaucocystophyceae Cryptophyta Haptophyta Stramenopiles Alveolata Rhizaria Apusozoa Excavata #=================================================================# # all other optional settings can be set or changed later # # in the web interface (under 'Datasets' tab) # #=================================================================# #width of the colored strip STRIP_WIDTH 50 #left margin, used to increase/decrease the spacing to the next dataset. Can be negative, causing datasets to overlap. #MARGIN 5 #border width; if set above 0, a border of specified width (in pixels) will be drawn around the color strip #BORDER_WIDTH 2 #border color; used when BORDER_WIDTH is above 0 #BORDER_COLOR #969696 #always show internal values; if set, values associated to internal nodes will be displayed even if these nodes are not collapsed. It could cause overlapping in the dataset display. #SHOW_INTERNAL 1 #Internal tree nodes can be specified using IDs directly, or using the 'last common ancestor' method described in iTOL help pages #=================================================================# # Actual data follows after the DATA keyword # #=================================================================# DATA MMETSP0413_7934_0_1_1_21992-136452-Filamoeba_nolandi-Amoebozoa #8dd3c7 Amoebozoa XP_004344254.1-192875-Capsaspora_owczarzaki-Other_Ophistokonts #ffff33 Other_Ophistokonts XP_001749478.1-81824-Monosiga_brevicollis-Other_Ophistokonts #ffff33 Other_Ophistokonts XP_004994707.1-946362-Salpingoeca_rosetta-Other_Ophistokonts #ffff33 Other_Ophistokonts MMETSP1042_21294_0_1_1_66537-464988-Hemiselmis_andersenii-Cryptophyta #80b1d3 Cryptophyta MMETSP0047_24865_1_1_1_99099-478117-Chroomonas_cf_mesostigmatica-Cryptophyta #80b1d3 Cryptophyta MMETSP0484_32706_0_1_1_58735-354590-Rhodomonas_lens-Cryptophyta #80b1d3 Cryptophyta MMETSP1102_20927_0_1_1_61621-46946-Geminigera-Cryptophyta #80b1d3 Cryptophyta 1kpJJZR2008916-110510-Rhodochaete_parvula-Rhodophyta #fb8072 Rhodophyta 1kpRTLC2007943-2801-Rhodella_violacea-Rhodophyta #fb8072 Rhodophyta MMETSP0314_9307_2_1_1_45898-2801-Rhodella_maculata-Rhodophyta #fb8072 Rhodophyta 1kpLLXJ2042995-139907-Chroodactylon_ornatum-Rhodophyta #fb8072 Rhodophyta MMETSP0011_4781_0_1_2_328-101924-Rhodosorus_marinus-Rhodophyta #fb8072 Rhodophyta MMETSP1136_22328_3_1_1_5956-13221-Chrysotila_carterae-Haptophyta #fdb462 Haptophyta MMETSP0008_16518_0_1_1_38860-97485-Prymnesium_parvum-Haptophyta #fdb462 Haptophyta MMETSP1100_32787_18_1_1_75821-33657-Phaeocystis_antarctica-Haptophyta #fdb462 Haptophyta MMETSP0166_15742_0_1_1_10070-1487602-Vannella_sp_CB_2014-Amoebozoa #8dd3c7 Amoebozoa MMETSP0308_9402_0_1_1_6690-38269-Gloeochaete_wittrockiana-Glaucocystophyceae #bebada Glaucocystophyceae 1kpPQED2013044-38269-Gloeochaete_wittrockiana-Glaucocystophyceae #bebada Glaucocystophyceae MMETSP1160_4742_0_1_1_49814-172671-Pinguiococcus_pyrenoidosus-Stramenopiles #b3de69 Stramenopiles MMETSP1163_4542_0_1_1_77646-124430-Phaeomonas_parva-Stramenopiles #b3de69 Stramenopiles 1kpYRMA2005822-127542-Sargassum_thunbergii-Stramenopiles #b3de69 Stramenopiles MMETSP1324_17595_6_1_1_31126-236786-Florenciella-Stramenopiles #b3de69 Stramenopiles MMETSP1344_17875_0_2_2_69071-236787-Florenciella_parvula-Stramenopiles #b3de69 Stramenopiles MMETSP0101_17597_17_1_1_24806-38822-Pteridomonas_danica-Stramenopiles #b3de69 Stramenopiles MMETSP1068_22635_0_1_1_92283-35684-Pseudopedinella_elastica-Stramenopiles #b3de69 Stramenopiles MMETSP1328_14996_0_1_1_23117-35677-Pelagomonas_calceolata-Stramenopiles #b3de69 Stramenopiles